Class for Simulation Results Enrichment Means
Source:R/class_simulation_results.R
SimulationResultsEnrichmentMeans.Rd
A class for simulation results means in enrichment designs.
Details
Use getSimulationEnrichmentMeans()
to create an object of this type.
Fields
maxNumberOfIterations
The number of simulation iterations. Is a numeric vector of length 1 containing a whole number.
seed
The seed used for random number generation. Is a numeric vector of length 1.
allocationRatioPlanned
The planned allocation ratio (
n1 / n2
) for the groups. For multi-arm designs, it is the allocation ratio relating the active arm(s) to the control. Is a positive numeric vector of length 1.conditionalPower
The conditional power at each stage of the trial. Is a numeric vector of length 1 containing a value between 0 and 1.
iterations
The number of iterations used for simulations. Is a numeric vector of length 1 containing a whole number.
futilityPerStage
The per-stage probabilities of stopping the trial for futility. Is a numeric matrix.
futilityStop
In simulation results data set: indicates whether trial is stopped for futility or not.
stDev
The standard deviation used for sample size and power calculation. Is a numeric vector of length 1.
plannedSubjects
Determines the number of cumulated (overall) subjects when the interim stages are planned. For two treatment arms, is the number of subjects for both treatment arms. For multi-arm designs, refers to the number of subjects per selected active arm. Is a numeric vector of length
kMax
containing whole numbers.minNumberOfSubjectsPerStage
Determines the minimum number of subjects per stage for data-driven sample size recalculation. For two treatment arms, is the number of subjects for both treatment arms. For multi-arm designs, is the minimum number of subjects per selected active arm. Is a numeric vector of length
kMax
containing whole numbers.maxNumberOfSubjectsPerStage
Determines the maximum number of subjects per stage for data-driven sample size recalculation. For two treatment arms, is the number of subjects for both treatment arms. For multi-arm designs, is the minimum number of subjects per selected active arm. Is a numeric vector of length
kMax
containing whole numbers.thetaH1
The assumed effect under the alternative hypothesis. For survival designs, refers to the hazard ratio. Is a numeric vector.
stDevH1
The standard deviation under which the conditional power or sample size recalculation is performed. Is a numeric vector of length 1.
calcSubjectsFunction
An optional function that can be entered to define how sample size is recalculated. By default, recalculation is performed with conditional power with specified
minNumberOfSubjectsPerStage
andmaxNumberOfSubjectsPerStage
.expectedNumberOfSubjects
The expected number of subjects under specified alternative.
populations
The number of populations in an enrichment design. Is a numeric vector of length 1 containing a whole number.
effectList
The list of subsets, prevalences and effect sizes with columns and number of rows reflecting the different situations to be considered.
intersectionTest
The multiple test used for intersection hypotheses in closed systems of hypotheses. Is a character vector of length 1.
stratifiedAnalysis
For enrichment designs, typically a stratified analysis should be chosen. When testing means and rates, a non-stratified analysis can be performed on overall data. For survival data, only a stratified analysis is possible. Is a logical vector of length 1.
adaptations
Indicates whether or not an adaptation takes place at interim k. Is a logical vector of length
kMax
minus 1.typeOfSelection
The way the treatment arms or populations are selected at interim. Is a character vector of length 1.
effectMeasure
Criterion for treatment arm/population selection, either based on test statistic (
"testStatistic"
) or effect estimate ("effectEstimate"
). Is a character vector of length 1.successCriterion
Defines when the study is stopped for efficacy at interim.
"all"
stops the trial if the efficacy criterion has been fulfilled for all selected treatment arms/populations,"atLeastOne"
stops if at least one of the selected treatment arms/populations is shown to be superior to control at interim. Is a character vector of length 1.epsilonValue
Needs to be specified if
typeOfSelection = "epsilon"
. Is a numeric vector of length 1.rValue
Needs to be specified if
typeOfSelection = "rBest"
. Is a numeric vector of length 1.threshold
The selection criterion: treatment arm/population is only selected if
effectMeasure
exceedsthreshold
. Either a single numeric value or a numeric vector of lengthactiveArms
referring to a separate threshold condition for each treatment arm.selectPopulationsFunction
An optional function that can be entered to define the way of how populations are selected.
earlyStop
The probability to stopping the trial either for efficacy or futility. Is a numeric vector.
selectedPopulations
The selected populations in enrichment designs.
numberOfPopulations
The number of populations in an enrichment design. Is a numeric matrix.
rejectAtLeastOne
The probability to reject at least one of the (multiple) hypotheses. Is a numeric vector.
rejectedPopulationsPerStage
The simulated number of rejected populations per stage.
successPerStage
The simulated success probabilities per stage where success is defined by user. Is a numeric matrix.
sampleSizes
The sample sizes for each group and stage. Is a numeric vector of length number of stages times number of groups containing whole numbers.
conditionalPowerAchieved
The calculated conditional power, under the assumption of observed or assumed effect sizes. Is a numeric matrix.